Basic Information
Locus ID:
populus_peu09263
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 23314091 | 23316044 | + | populus_peu09263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 50,023.99 Da | 36.08 | 94.05 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 133 | 398 | 5.6E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 113 | 402 | 5.33E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 103 | 208 | 2.1E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 209 | 421 | 7.8E-61 | - |
| SMART | SM00220 | serkin_6 | 132 | 401 | 1.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 132 | 387 | 34.647392 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 138 | 160 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 432 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_011012715.1 | PREDICTED: protein NSP-INTERACTING KINASE 1-like isoform X2 [Populus euphratica] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7ZUU0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_017363 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology