Basic Information
Locus ID:
populus_peu09116
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 15167270 | 15170224 | + | populus_peu09116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 52,629.89 Da | 52.03 | 79.70 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 5.9E-69 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 204 | 304 | 7.0E-45 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 6 | 147 | 3.01E-26 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 209 | 311 | 5.63E-17 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 147 | 4.8E-20 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 197 | 310 | 7.9E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 360 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_011013129.1 | PREDICTED: uncharacterized protein LOC105117238 isoform X1 [Populus euphratica] | 0 |
| TrEMBL | A0A8T2Z0T7 | Actin cross-linking OS=Populus deltoides OX=3696 GN=H0E87_008488 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology