Basic Information
Locus ID:
populus_peu08976
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7993793 | 8000197 | + | populus_peu08976 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 67,187.03 Da | 44.85 | 77.94 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 143 | 403 | 5.45525E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 143 | 404 | 2.5E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 433 | 4.45E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 432 | 586 | 5.03E-16 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 144 | 230 | 1.5E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 421 | 4.2E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 429 | 583 | 5.0E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 422 | 513 | 5.0E-19 | - |
| SMART | SM00220 | serkin_6 | 142 | 404 | 1.1E-101 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 142 | 404 | 51.113503 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 266 | 278 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 148 | 174 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 125 | - | - |
| Coils | Coil | Coil | 100 | 120 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_011001201.1 | PREDICTED: CDPK-related kinase 5-like [Populus euphratica] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8A3M6 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_015839 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology