Basic Information
Locus ID:
populus_peu08816
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5994579 | 5998533 | + | populus_peu08816 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 49,301.43 Da | 39.63 | 75.35 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 385 | 433 | 3.8E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 339 | 436 | 1.1E-15 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 123 | 334 | 1.38E-23 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 123 | 343 | 6.4E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 368 | 444 | 4.8E-14 | - |
| SMART | SM00326 | SH3_2 | 381 | 436 | 7.9E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 378 | 437 | 18.77146 | IPR001452 |
| Coils | Coil | Coil | 262 | 289 | - | - |
| Coils | Coil | Coil | 225 | 245 | - | - |
| Coils | Coil | Coil | 296 | 316 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_011037191.1 | PREDICTED: intersectin-1-like [Populus euphratica] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2FBY8 | SH3 domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology