Basic Information
Locus ID:
populus_peu08802
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5775529 | 5778479 | + | populus_peu08802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 35,797.29 Da | 54.00 | 66.16 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 184 | 6.8E-80 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 1.6E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 107 | 7.9E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 310 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_011037217.1 | PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Populus euphratica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X8A2V7 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_015969 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology