Basic Information
Locus ID:
populus_peu08740
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5310774 | 5315750 | + | populus_peu08740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 143,784.88 Da | 46.20 | 77.99 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 721 | 966 | 3.16372E-136 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1058 | 1303 | 1.3E-105 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 749 | 910 | 1.3E-29 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 746 | 883 | 1.7E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 719 | 966 | 2.5E-57 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 654 | 1054 | 4.3E-200 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 746 | 975 | 32.534954 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 675 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_011037288.1 | PREDICTED: translocase of chloroplast 120, chloroplastic isoform X1 [Populus euphratica] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YZW6 | AIG1-type G domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008211 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology