Basic Information
Locus ID:
populus_peu08594
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4002722 | 4008668 | + | populus_peu08594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 63,164.64 Da | 44.93 | 81.08 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 256 | 483 | 4.8E-61 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 10 | 213 | 7.7E-74 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 274 | 450 | 3.5E-214 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 18 | 484 | 3.5E-214 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_011046267.1 | PREDICTED: proteinaceous RNase P 2-like [Populus euphratica] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YZB6 | ribonuclease P OS=Populus deltoides OX=3696 GN=H0E87_008088 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology