Basic Information
Locus ID:
populus_peu08183
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 448050 | 455665 | + | populus_peu08183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 106,483.27 Da | 29.44 | 92.25 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 653 | 922 | 4.06963E-96 | - |
| Pfam | PF13855 | Leucine rich repeat | 129 | 188 | 5.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 648 | 917 | 3.5E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 368 | 4.08E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 632 | 925 | 2.02E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 399 | 2.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 197 | 8.6E-42 | IPR032675 |
| Gene3D | G3DSA:1.20.5.510 | Single helix bin | 564 | 602 | 8.9E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 723 | 943 | 5.0E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 299 | 6.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 620 | 722 | 2.5E-33 | - |
| SMART | SM00220 | serkin_6 | 647 | 923 | 8.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 647 | 923 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 767 | 779 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 653 | 675 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011028446.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Populus euphratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | U5GHD8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G232400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology