Basic Information
Locus ID:
populus_peu08182
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 436155 | 442625 | + | populus_peu08182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 103,661.66 Da | 32.42 | 91.04 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 633 | 900 | 3.81292E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 630 | 897 | 2.1E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 403 | 6.12E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 608 | 897 | 6.15E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 597 | 702 | 1.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 422 | 2.9E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 281 | 1.9E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 180 | 1.1E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 918 | 8.5E-59 | - |
| SMART | SM00220 | serkin_6 | 627 | 904 | 2.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 627 | 900 | 38.661449 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 264 | 286 | 7.134402 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 747 | 759 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 633 | 655 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011028445.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8A1P3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_016484 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology