Basic Information
Locus ID:
populus_peu08152
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 154295 | 155757 | + | populus_peu08152 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 42,842.77 Da | 31.08 | 105.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 93 | 315 | 5.7E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 371 | 3.37E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 163 | 4.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 164 | 376 | 2.5E-46 | - |
| SMART | SM00220 | serkin_6 | 88 | 371 | 2.2E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 379 | 30.675739 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 211 | 223 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28250.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011028497.1 | PREDICTED: pto-interacting protein 1-like isoform X1 [Populus euphratica] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K2AZB4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G235700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23657 |
| Apiaceae | Apium graveolens | 1 | Ag9G01571 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G24301 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0049, Ceq01G0050 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0028 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00003742 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.765 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17650 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000025l.5 |
| Salicaceae | Populus euphratica | 1 | populus_peu08152 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132638246 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027833 |