Basic Information
Locus ID:
populus_peu07783
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13854246 | 13859813 | + | populus_peu07783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 59,372.13 Da | 50.69 | 75.42 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 230 | 371 | 4.7E-74 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 145 | 2.3E-61 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 8 | 148 | 3.66E-18 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 234 | 376 | 1.83E-26 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 145 | 9.5E-14 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 238 | 368 | 2.7E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 437 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_011034200.1 | PREDICTED: uncharacterized protein LOC105132407 [Populus euphratica] | 0 |
| TrEMBL | B9HLW9 | DUF569 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G193900 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology