Basic Information
Locus ID:
populus_peu07240
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein 21-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 9234028 | 9235749 | - | populus_peu07240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 49,397.08 Da | 41.36 | 100.79 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 35 | 77 | 3.31707E-23 | - |
| Pfam | PF04564 | U-box domain | 31 | 102 | 2.1E-20 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 22 | 107 | 1.15E-28 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 130 | 422 | 1.56E-20 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 107 | 5.4E-27 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 123 | 420 | 2.2E-19 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 34 | 97 | 1.4E-27 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 30 | 104 | 32.341644 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_011024493.1 | PREDICTED: U-box domain-containing protein 21-like [Populus euphratica] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8CTL2 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_030059 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology