Basic Information
Locus ID:
populus_peu07150
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 8429206 | 8437375 | - | populus_peu07150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 173,872.73 Da | 51.20 | 74.56 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00065 | FYVE_like_SF | 45 | 93 | 0.00321113 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1361 | 1549 | 1.11942E-95 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 351 | 623 | 3.2221E-129 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1400 | 1549 | 1.2E-24 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 370 | 612 | 7.2E-34 | IPR002423 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 39 | 95 | 9.21E-6 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1355 | 1549 | 2.03E-52 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 417 | 589 | 1.09E-39 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 372 | 609 | 8.85E-5 | IPR027410 |
| Gene3D | G3DSA:3.30.810.10 | - | 1483 | 1558 | 1.7E-10 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1328 | 1481 | 4.4E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 416 | 589 | 1.2E-51 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1336 | 1558 | 9.6E-38 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 40 | 93 | 8.760035 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1304 | 1559 | 37.724552 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1074 | 1090 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1064 | 1092 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 129 | - | - |
| Coils | Coil | Coil | 990 | 1020 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_011023165.1 | PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X2 [Populus euphratica] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2Y6D8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Populus deltoides OX=3696 GN=H0E87_015764 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology