Basic Information
Locus ID:
populus_peu06954
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6968065 | 6970654 | + | populus_peu06954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 39,783.77 Da | 42.71 | 95.89 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 122 | 180 | 1.2E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 304 | 364 | 2.7E-6 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 2.4E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 364 | 3.51E-17 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 198 | 3.06E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 365 | 8.7E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 210 | 5.3E-51 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 365 | 11.481769 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_002311408.3 | protein NSP-INTERACTING KINASE 2 [Populus trichocarpa] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | B9HIT4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G110300 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology