Basic Information
Locus ID:
populus_peu06891
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PAS fold
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6585356 | 6592075 | - | populus_peu06891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 87,190.55 Da | 50.04 | 69.77 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 506 | 738 | 2.89004E-123 | - |
| CDD | cd00130 | PAS | 134 | 235 | 1.61369E-12 | IPR000014 |
| Pfam | PF00989 | PAS fold | 126 | 233 | 2.4E-12 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 500 | 738 | 2.3E-62 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 129 | 232 | 1.22E-18 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 740 | 2.16E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 579 | 760 | 1.8E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 493 | 577 | 5.5E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 135 | 239 | 2.9E-22 | - |
| SMART | SM00091 | pas_2 | 125 | 192 | 2.5E-10 | IPR000014 |
| SMART | SM00220 | serkin_6 | 500 | 753 | 2.5E-50 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 125 | 235 | 5.2E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 500 | 784 | 39.000664 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 123 | 194 | 18.633949 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 461 | - | - |
| Coils | Coil | Coil | 7 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_011019912.1 | PREDICTED: serine/threonine-protein kinase pakF-like isoform X1 [Populus euphratica] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZF35 | Serine/threonine-protein kinase EDR1-like OS=Populus trichocarpa OX=3694 GN=POPTR_008G105100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology