Basic Information
Locus ID:
populus_peu06871
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6459004 | 6461580 | + | populus_peu06871 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 38,543.82 Da | 29.54 | 88.93 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 7.20378E-76 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 173 | 1.26237E-67 | - |
| Pfam | PF00190 | Cupin | 12 | 157 | 7.2E-29 | IPR006045 |
| Pfam | PF00190 | Cupin | 198 | 337 | 5.4E-20 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 344 | 6.17E-52 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 195 | 2.6E-36 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 196 | 356 | 8.5E-49 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 7.8E-16 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 9.9E-31 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 2.0E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 2.0E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 2.0E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 2.0E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 2.0E-13 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_011019583.1 | PREDICTED: 12S seed storage globulin 1-like [Populus euphratica] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | B9HIL6 | 11S globulin OS=Populus trichocarpa OX=3694 GN=POPTR_008G102900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology