Basic Information
Locus ID:
populus_peu06809
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 5954984 | 5958334 | + | populus_peu06809 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 105,274.51 Da | 31.78 | 100.60 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 696 | 964 | 1.45091E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 73 | 3.5E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 211 | 232 | 0.13 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 959 | 1.3E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 517 | 574 | 6.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 170 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 101 | 580 | 3.77E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 961 | 5.4E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 407 | 589 | 2.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 96 | 6.1E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 97 | 394 | 1.4E-65 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 965 | 4.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 654 | 765 | 4.9E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 538 | 561 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 58.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 964 | 2.4E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 157 | 181 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 280 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 133 | 156 | 47.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 967 | 40.569538 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 540 | 562 | 7.172906 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 5.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_011018699.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Populus euphratica] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7FIP6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G096400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology