Basic Information
Locus ID:
populus_peu06766
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 5668518 | 5671685 | - | populus_peu06766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 53,703.87 Da | 59.25 | 52.64 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 219 | 275 | 6.7E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 388 | 445 | 1.7E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 379 | 447 | 1.09E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 216 | 277 | 4.32E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 206 | 278 | 3.6E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 372 | 448 | 2.1E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 387 | 446 | 1.2E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 218 | 276 | 5.2E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 382 | 447 | 38.193405 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 213 | 277 | 23.571198 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_011017961.1 | PREDICTED: probable WRKY transcription factor 3 [Populus euphratica] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | B9HIB5 | WRKY transcription factor 3 OS=Populus trichocarpa OX=3694 GN=POPTR_008G091900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology