Basic Information
Locus ID:
populus_peu06324
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2466277 | 2473091 | - | populus_peu06324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 154,403.20 Da | 47.61 | 68.28 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 809 | 895 | 1.80511E-30 | - |
| Pfam | PF00855 | PWWP domain | 810 | 895 | 8.0E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 807 | 925 | 1.08E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 803 | 902 | 1.7E-25 | - |
| SMART | SM00293 | PWWP_4 | 809 | 870 | 3.6E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 811 | 872 | 14.383328 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1079 | 1101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 25 | - | - |
| Coils | Coil | Coil | 655 | 675 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_011029709.1 | PREDICTED: uncharacterized protein LOC105129100 isoform X1 [Populus euphratica] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A385JIA8 | Tudor/PWWP/MBT superfamily protein OS=Populus tomentosa OX=118781 GN=PWWP-2 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology