Basic Information
Locus ID:
populus_peu06262
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2077580 | 2081418 | - | populus_peu06262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 70,214.35 Da | 43.70 | 92.71 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 25 | 131 | 1.5E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 212 | 476 | 7.1E-95 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 130 | 9.42E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 131 | 2.0E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 500 | 94.221245 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.254053 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 627 | - | - |
| Coils | Coil | Coil | 545 | 572 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_011031728.1 | PREDICTED: BTB/POZ domain-containing protein At5g03250-like [Populus euphratica] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1ZBB0 | NPH3 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G038600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology