Basic Information
Locus ID:
populus_peu06187
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1555477 | 1560918 | - | populus_peu06187 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 80,672.89 Da | 70.92 | 56.62 | -1.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 419 | - | - |
| Coils | Coil | Coil | 48 | 68 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.5 | - | 0 |
| RefSeq | XP_011031593.1 | PREDICTED: uncharacterized protein LOC105130682 [Populus euphratica] | 0 |
| TrEMBL | A0A8T2Y9Y3 | RING-type domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_016559 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology