Basic Information
Locus ID:
populus_peu05875
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 28992878 | 28996164 | - | populus_peu05875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 77,308.10 Da | 41.47 | 92.19 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 168 | 228 | 9.4E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 395 | 666 | 5.3E-32 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 75 | 116 | 1.1E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 672 | 1.3E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 99 | 272 | 1.91E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 75 | 187 | 4.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 466 | 1.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 283 | 1.4E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 690 | 2.3E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 391 | 681 | 28.046816 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 703 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011017610.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5MY19 | Leucine-rich repeat transmembrane protein kinase OS=Populus alba OX=43335 GN=D5086_0000290740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology