Basic Information
Locus ID:
populus_peu05821
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 28476556 | 28479758 | + | populus_peu05821 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 91,406.85 Da | 36.93 | 90.88 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 501 | 774 | 2.53733E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 61 | 5.4E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 498 | 768 | 2.6E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 325 | 380 | 2.5E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 186 | 207 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 279 | 316 | 0.18 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 64 | 382 | 4.08E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 771 | 6.34E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 795 | 7.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 395 | 1.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 572 | 6.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 283 | 5.7E-60 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 367 | 389 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 495 | 775 | 3.0E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 207 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 366 | 330.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 495 | 775 | 40.838085 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 501 | 523 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 620 | 632 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011017684.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WKZ6 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_029118 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology