Basic Information
Locus ID:
populus_peu05766
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 27977036 | 27981410 | - | populus_peu05766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 68,627.50 Da | 44.86 | 97.10 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 472 | 494 | 0.79 | IPR001611 |
| Pfam | PF00646 | F-box domain | 62 | 104 | 1.1E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 392 | 414 | 0.17 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 261 | 283 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 60 | 100 | 1.02E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 263 | 514 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 357 | 1.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 358 | 418 | 5.6E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 419 | 576 | 1.8E-20 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 64 | 98 | 3.4E-5 | - |
| SMART | SM00367 | LRR_CC_2 | 472 | 496 | 17.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 446 | 471 | 0.095 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 286 | 311 | 33.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 392 | 417 | 0.083 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 339 | 364 | 690.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 260 | 285 | 0.003 | IPR006553 |
| SMART | SM00256 | fbox_2 | 66 | 107 | 0.0012 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 366 | 391 | 0.14 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 312 | 337 | 94.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 419 | 444 | 27.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011017769.1 | PREDICTED: EIN3-binding F-box protein 1-like [Populus euphratica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WMM5 | F-box domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_029215 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology