Basic Information
Locus ID:
populus_peu05702
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 27406693 | 27410703 | + | populus_peu05702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 87,973.99 Da | 50.30 | 87.49 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 514 | 778 | 4.7E-116 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 168 | 319 | 1.9E-19 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 296 | 4.2E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 384 | 2.1E-48 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 51 | 781 | 8.0E-207 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 165 | 395 | 25.347563 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 79 | - | - |
| Coils | Coil | Coil | 478 | 498 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_011017867.1 | PREDICTED: translocase of chloroplast 90, chloroplastic-like [Populus euphratica] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | U7E2E5 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G123300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology