Basic Information
Locus ID:
populus_peu05620
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 26762769 | 26766124 | - | populus_peu05620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 81,066.23 Da | 43.97 | 90.29 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 34 | 333 | 3.5478E-159 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 350 | 649 | 7.66662E-153 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 355 | 645 | 3.6E-24 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 41 | 327 | 8.7E-9 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 351 | 650 | 4.19E-44 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 33 | 333 | 1.2E-40 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 349 | 651 | 1.0E-46 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 32 | 334 | 1.9E-36 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 34 | 334 | 25.413542 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 350 | 650 | 31.040771 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58050.1 | SHV3-like 4. | 0 |
| RefSeq | XP_002325146.2 | glycerophosphodiester phosphodiesterase GDPDL6 [Populus trichocarpa] | 0 |
| Q9FGT9 | Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2WP76 | glycerophosphodiester phosphodiesterase OS=Populus deltoides OX=3696 GN=H0E87_029337 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology