Basic Information
Locus ID:
populus_peu05538
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 26004656 | 26008201 | - | populus_peu05538 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 51,018.13 Da | 33.69 | 103.31 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 117 | 176 | 3.0E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.9E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 297 | 464 | 1.7E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 465 | 8.88E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 279 | 5.35E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 263 | 370 | 9.4E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 466 | 4.3E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 207 | 4.1E-54 | IPR032675 |
| SMART | SM00220 | serkin_6 | 294 | 471 | 2.1E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 471 | 28.866587 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.2 | - | 0 |
| RefSeq | XP_011018089.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Populus euphratica] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7G7Z9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G101300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology