Basic Information
Locus ID:
populus_peu05356
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 23535449 | 23537588 | - | populus_peu05356 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 70,875.44 Da | 33.38 | 104.69 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 63 | 105 | 2.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 61 | 1.6E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 192 | 211 | 0.28 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 239 | 252 | 1.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 471 | 486 | 0.39 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 207 | 509 | 1.1E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 599 | 640 | 6.15E-5 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 52 | 303 | 4.79E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 538 | 1.2E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 238 | 2.8E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 157 | 5.5E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 493 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 166 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 69 | 93 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 220.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 192 | 214 | 7.842867 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 617 | 639 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 493 | 506 | 5.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 193 | 206 | 5.8E-5 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011007100.1 | PREDICTED: receptor-like protein kinase HSL1, partial [Populus euphratica] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WMJ4 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_029519 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology