Basic Information
Locus ID:
populus_peu04987
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 6834463 | 6836460 | - | populus_peu04987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 73,764.87 Da | 36.36 | 108.74 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 108 | 150 | 1.2E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 568 | 590 | 0.25 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 556 | 2.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 63 | 1.9E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 236 | 253 | 0.28 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 252 | 603 | 4.0E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 371 | 2.52E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 490 | 610 | 2.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 489 | 2.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 134 | 2.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 178 | 2.4E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 379 | 6.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 281 | 2.1E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 161 | 185 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 190.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 161 | 190 | 84.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 258 | 284 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 89 | 121 | 0.71 | - |
| SMART | SM00369 | LRR_typ_2 | 305 | 329 | 270.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 210 | 236 | 300.0 | - |
| SMART | SM00369 | LRR_typ_2 | 543 | 567 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 7.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 71.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 236 | 258 | 7.480934 | IPR001611 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011010885.1 | PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Populus euphratica] | 0 |
| Q7FZR1 | Receptor-like protein 52 OS=Arabidopsis thaliana OX=3702 GN=RLP52 PE=2 SV=1 | 0 | |
| TrEMBL | B9INH9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G057100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology