Basic Information
Locus ID:
populus_peu04763
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 2227958 | 2232540 | - | populus_peu04763 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 69,191.41 Da | 46.40 | 107.12 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 218 | 241 | 0.0011 | IPR001611 |
| Pfam | PF00646 | F-box domain | 69 | 110 | 4.3E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 269 | 292 | 0.29 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 244 | 266 | 0.72 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 179 | 644 | 8.01E-39 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 65 | 105 | 6.28E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 420 | 4.7E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 646 | 3.6E-33 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 114 | 7.7E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 456 | 481 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 561 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 482 | 507 | 0.02 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 562 | 586 | 39.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 402 | 427 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 218 | 243 | 1.2E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 270 | 295 | 4.9E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 376 | 401 | 0.34 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 0.0019 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 509 | 536 | 79.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 192 | 217 | 0.068 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 244 | 269 | 3.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 350 | 375 | 0.11 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 590 | 613 | 31.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_011036551.1 | PREDICTED: EIN3-binding F-box protein 1-like [Populus euphratica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7XVF0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_056877 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology