HalophFGD

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Basic Information
Locus ID: populus_peu04600
Species & Taxonomic ID: Populus euphratica & 75702
Genome Assembly: GWHAAYU00000000
Description: FBD
Maps and Mapping Data
Chromosome Start End Strand ID
chr18 740145 741429 - populus_peu04600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.55 30,711.32 Da 45.33 92.45 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 156 194 1.8E-5 IPR006566
Best hit
Source Best Hit ID Description E-value
RefSeq XP_011044988.1 PREDICTED: uncharacterized protein LOC105140033 isoform X1 [Populus euphratica] 0
TrEMBL A0A3N7HVI3 FBD domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G007201 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Arabidopsis thaliana 1 AT3G55900.1
Portulacaceae Portulaca oleracea 1 evm.TU.LG14.1166
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_12_RagTag.38
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-24763, nbisL1-mrna-24764
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000027l.260
Salicaceae Populus euphratica 1 populus_peu04600
Tamaricaceae Reaumuria soongarica 14 MSTRG.13023_chr07_+, MSTRG.13852_chr08_-, MSTRG.4576_chr03_- ...
MSTRG.15132_chr08_+, MSTRG.15133_chr08_+, MSTRG.15135_chr08_+, MSTRG.18702_chr10_-, MSTRG.20157_chr11_+, MSTRG.4804_chr03_-, MSTRG.5624_chr04_-, MSTRG.6372_chr04_+, STRG.17807_chr09_-, STRG.29776_chr10_+, STRG.5513_chr04_-
Tamaricaceae Tamarix chinensis 2 TC07G1245, TC08G0764
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.