Basic Information
Locus ID:
populus_peu04440
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 66160054 | 66161403 | - | populus_peu04440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 38,775.53 Da | 45.49 | 65.74 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 161 | 206 | 6.7E-13 | IPR006652 |
| Pfam | PF00646 | F-box domain | 11 | 50 | 9.9E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 118 | 158 | 2.6E-9 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 83 | 303 | 9.02E-43 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 52 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 46 | 2.9E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 47 | 284 | 6.6E-41 | IPR015915 |
| SMART | SM00612 | kelc_smart | 172 | 219 | 9.3E-10 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 2.5E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 123 | 171 | 7.7E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011048231.1 | PREDICTED: F-box/kelch-repeat protein At1g15670-like [Populus euphratica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X8ANU4 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_003619 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology