Basic Information
Locus ID:
populus_peu04039
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 63099764 | 63103300 | + | populus_peu04039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 66,276.20 Da | 49.86 | 74.06 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 309 | 566 | 1.02751E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 305 | 566 | 3.0E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 291 | 566 | 1.19E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 296 | 390 | 6.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 391 | 583 | 2.2E-51 | - |
| SMART | SM00220 | serkin_6 | 303 | 569 | 2.1E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 568 | 40.131386 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 330 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 493 | 515 | 2.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 385 | 398 | 2.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 537 | 559 | 2.4E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 422 | 440 | 2.4E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_011002174.1 | PREDICTED: uncharacterized protein LOC105109241 [Populus euphratica] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2ZYM6 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_003246 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology