Basic Information
Locus ID:
populus_peu03852
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 61418937 | 61423512 | - | populus_peu03852 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 64,519.15 Da | 39.16 | 110.57 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 175 | 231 | 1.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 343 | 401 | 3.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 248 | 270 | 0.83 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 74 | 2.4E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 488 | 548 | 3.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 343 | 578 | 1.25E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 384 | 6.12E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 142 | 1.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 462 | 4.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 390 | 6.7E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 463 | 580 | 7.4E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 228 | 8.9E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 173 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 389 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 220 | 140.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 368 | 389 | 7.273015 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 369 | 382 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 535 | 548 | 2.7E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_011004295.1 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X2 [Populus euphratica] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8X8AJX5 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_004125 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology