Basic Information
Locus ID:
populus_peu03765
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 60631164 | 60632579 | + | populus_peu03765 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 52,690.58 Da | 47.15 | 74.73 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 295 | 340 | 1.3E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 24 | 196 | 2.7E-47 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 291 | 355 | 6.54E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 289 | 357 | 7.6E-17 | IPR036638 |
| SMART | SM00353 | finulus | 297 | 346 | 5.4E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 291 | 340 | 17.027958 | IPR011598 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 405 | 471 | 8.519936 | IPR002912 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 256 | - | - |
| Coils | Coil | Coil | 330 | 357 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_011026782.1 | PREDICTED: transcription factor MYC2-like [Populus euphratica] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | B9GK72 | BHLH domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G083500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology