Basic Information
Locus ID:
populus_peu03629
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 59435429 | 59442108 | - | populus_peu03629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 88,765.03 Da | 41.32 | 84.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 523 | 656 | 5.23902E-25 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 525 | 655 | 1.8E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 678 | 719 | 7.0E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 485 | 763 | 2.17E-59 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 657 | 761 | 1.9E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 484 | 768 | 1.9E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 521 | 658 | 1.1E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 628 | 647 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 446 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_011026962.1 | PREDICTED: cell division control protein 48 homolog C-like [Populus euphratica] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2ZWW4 | AAA domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_002895 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology