Basic Information
Locus ID:
populus_peu03371
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 57038981 | 57047162 | - | populus_peu03371 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 147,717.47 Da | 42.41 | 74.61 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1049 | 1306 | 5.71666E-111 | - |
| CDD | cd06410 | PB1_UP2 | 244 | 339 | 3.45072E-44 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1044 | 1306 | 7.0E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 257 | 340 | 1.3E-20 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1035 | 1305 | 8.86E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 256 | 346 | 3.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1131 | 1330 | 6.9E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1036 | 1130 | 1.3E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 259 | 341 | 9.0E-12 | - |
| SMART | SM00666 | PB1_new | 255 | 341 | 1.1E-31 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1043 | 1309 | 1.3E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1043 | 1308 | 41.332775 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1049 | 1074 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1168 | 1180 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1162 | 1180 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1233 | 1255 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1277 | 1299 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1125 | 1138 | 1.8E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2BWJ4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G123500 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology