Basic Information
Locus ID:
populus_peu03315
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 56603091 | 56608472 | - | populus_peu03315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 41,662.81 Da | 48.32 | 83.14 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 305 | 353 | 3.2E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 45 | 254 | 2.62E-23 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 287 | 361 | 1.16E-15 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 283 | 368 | 2.9E-16 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 276 | 1.1E-10 | IPR027267 |
| SMART | SM00326 | SH3_2 | 301 | 356 | 9.8E-14 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 298 | 357 | 19.769812 | IPR001452 |
| Coils | Coil | Coil | 148 | 168 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 189 | 209 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_011018378.1 | PREDICTED: endophilin-A3 isoform X1 [Populus euphratica] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | B9MUF1 | SH3 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G128800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology