Basic Information
Locus ID:
populus_peu02939
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 52789506 | 52799816 | + | populus_peu02939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 181,132.30 Da | 53.74 | 74.02 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 390 | 662 | 2.09636E-136 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1580 | 1622 | 1.7E-7 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 411 | 656 | 3.5E-32 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 1.1E-17 | IPR000306 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 105 | 1.2E-19 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 456 | 628 | 2.15E-42 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1533 | 1623 | 5.95E-23 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1502 | 1624 | 6.1E-27 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 455 | 628 | 1.4E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 107 | 2.6E-21 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1514 | 1624 | 8.4E-4 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 9.1E-19 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.710215 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1486 | 1624 | 15.151275 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1323 | 1345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 821 | 838 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 812 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 223 | - | - |
| Coils | Coil | Coil | 1102 | 1129 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_011048619.1 | PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Populus euphratica] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2BYQ1 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Populus trichocarpa OX=3694 GN=POPTR_001G163200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology