Basic Information
Locus ID:
populus_peu02786
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 50517142 | 50518209 | + | populus_peu02786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 39,709.05 Da | 41.24 | 77.94 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 202 | 1.4E-8 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 107 | 156 | 8.0E-8 | - |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 337 | 6.93E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 59 | 350 | 9.2E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 168 | 0.21 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.6E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011002708.1 | PREDICTED: F-box/kelch-repeat protein At1g80440 [Populus euphratica] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6M2E6K1 | F-box domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology