Basic Information
Locus ID:
populus_peu02716
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 48905812 | 48909822 | - | populus_peu02716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 37,506.57 Da | 37.03 | 66.02 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 58 | 338 | 1.8E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 228 | 328 | 4.91E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 224 | 340 | 4.5E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 228 | 329 | 26.528988 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 192 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_011009359.1 | PREDICTED: auxin-responsive protein IAA27-like [Populus euphratica] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2BZW3 | Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G186100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology