Basic Information
Locus ID:
populus_peu02456
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase Nek5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41016346 | 41024590 | - | populus_peu02456 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 106,012.97 Da | 53.91 | 73.81 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 7 | 262 | 1.19743E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 8 | 262 | 6.4E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 316 | 8.77E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 87 | 3.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 332 | 5.4E-60 | - |
| SMART | SM00220 | serkin_6 | 8 | 262 | 1.2E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 8 | 262 | 46.845036 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 14 | 37 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44200.1 | NIMA (never in mitosis, gene A)-related 6. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. | 0 |
| RefSeq | XP_011010005.1 | PREDICTED: serine/threonine-protein kinase Nek5-like [Populus euphratica] | 0 |
| Q0WPH8 | Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana OX=3702 GN=NEK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V5ZXA1 | Serine/threonine-protein kinase Nek5-like OS=Populus alba OX=43335 GN=D5086_0000326360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology