Basic Information
Locus ID:
populus_peu02333
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 37685463 | 37689682 | - | populus_peu02333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 108,721.86 Da | 45.25 | 66.95 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 115 | 201 | 2.71739E-27 | - |
| Pfam | PF00855 | PWWP domain | 115 | 200 | 1.5E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 112 | 215 | 1.56E-27 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 107 | 210 | 3.7E-28 | - |
| SMART | SM00293 | PWWP_4 | 115 | 176 | 4.8E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 117 | 178 | 14.85107 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 807 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 807 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_011014430.1 | PREDICTED: uncharacterized protein LOC105118231 isoform X1 [Populus euphratica] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8A0B3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_017500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology