Basic Information
Locus ID:
populus_peu02104
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 32305567 | 32308601 | - | populus_peu02104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 35,149.65 Da | 45.37 | 69.62 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 11 | 182 | 2.5E-79 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 107 | 180 | 8.8E-35 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 1 | 106 | 2.4E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 314 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_011035285.1 | PREDICTED: ubiquitin fusion degradation protein 1 homolog [Populus euphratica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2ZRZ7 | Ubiquitin fusion degradation protein 1 homolog OS=Populus deltoides OX=3696 GN=H0E87_001701 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology