Basic Information
Locus ID:
populus_peu01939
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 30394036 | 30399143 | + | populus_peu01939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 59,864.79 Da | 37.80 | 85.08 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 60 | 318 | 2.44038E-139 | - |
| CDD | cd00051 | EFh | 438 | 500 | 1.96909E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 367 | 426 | 7.5E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 319 | 2.4E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 437 | 500 | 2.9E-13 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 329 | 1.13E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 512 | 1.11E-41 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 146 | 8.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 327 | 5.6E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 328 | 502 | 6.0E-49 | - |
| SMART | SM00054 | efh_1 | 438 | 466 | 0.43 | IPR002048 |
| SMART | SM00054 | efh_1 | 402 | 430 | 1.3 | IPR002048 |
| SMART | SM00220 | serkin_6 | 61 | 319 | 2.1E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 366 | 394 | 0.04 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 9.5E-6 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 319 | 49.40329 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 9.21328 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 362 | 397 | 12.588623 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 11.305434 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 67 | 90 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_011045425.1 | PREDICTED: calcium-dependent protein kinase 7-like [Populus euphratica] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | B9GEZ7 | Calcium-dependent protein kinase OS=Populus trichocarpa OX=3694 GN=POPTR_001G257100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology