Basic Information
Locus ID:
populus_peu01605
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 26878424 | 26881788 | - | populus_peu01605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 68,813.98 Da | 34.11 | 89.95 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 216 | 469 | 3.1E-87 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 33 | 123 | 5.6E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 27 | 123 | 4.87E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 127 | 3.4E-12 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 35 | 103 | 10.054498 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 216 | 493 | 85.834404 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 531 | - | - |
| Coils | Coil | Coil | 533 | 553 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_011030353.1 | PREDICTED: BTB/POZ domain-containing protein NPY2-like [Populus euphratica] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2C5Q9 | NPH3 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G295600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology