Basic Information
Locus ID:
populus_peu01209
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Gamma-glutamyltranspeptidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 21931338 | 21945423 | + | populus_peu01209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 116,461.38 Da | 39.20 | 84.79 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01593 | Flavin containing amine oxidoreductase | 25 | 492 | 1.4E-74 | IPR002937 |
| Pfam | PF01019 | Gamma-glutamyltranspeptidase | 549 | 1066 | 6.7E-175 | - |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 13 | 495 | 6.47E-44 | IPR036188 |
| SUPERFAMILY | SSF54373 | FAD-linked reductases, C-terminal domain | 335 | 444 | 2.35E-31 | - |
| SUPERFAMILY | SSF56235 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 524 | 1071 | 4.63E-159 | IPR029055 |
| Gene3D | G3DSA:3.50.50.60 | - | 18 | 488 | 8.5E-148 | IPR036188 |
| Gene3D | G3DSA:3.90.660.20 | Protoporphyrinogen oxidase, mitochondrial; domain 2 | 53 | 446 | 8.5E-148 | - |
| Gene3D | G3DSA:1.10.246.130 | - | 756 | 861 | 1.0E-27 | IPR043138 |
| Gene3D | G3DSA:3.60.20.40 | - | 864 | 1071 | 1.1E-63 | IPR043137 |
| Gene3D | G3DSA:1.10.3110.10 | protoporphyrinogen ix oxidase, domain 3 | 111 | 217 | 8.5E-148 | - |
| TIGRFAM | TIGR00562 | proto_IX_ox: protoporphyrinogen oxidase | 15 | 496 | 8.6E-76 | IPR004572 |
| TIGRFAM | TIGR00066 | g_glut_trans: gamma-glutamyltransferase | 534 | 1030 | 2.3E-124 | IPR000101 |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 642 | 661 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 556 | 581 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 740 | 756 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 956 | 973 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 932 | 947 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 869 | 887 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 770 | 789 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 893 | 911 | 2.8E-83 | - |
| PRINTS | PR01210 | Gamma-glutamyltranspeptidase signature | 624 | 642 | 2.8E-83 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Reaction:
R00494 (Glutathione + H2O <=> Cys-Gly + L-Glutamate)
R01262 (Glutathione + L-Amino acid <=> Cys-Gly + (5-L-Glutamyl)-L-amino acid)
R01687 ((5-L-Glutamyl)-peptide + Taurine <=> Peptide + 5-L-Glutamyl-taurine)
R03867 (Leukotriene C4 + Amino acid <=> Leukotriene D4 + 5-L-Glutamyl amino acid)
R03916 (R-S-Glutathione + H2O <=> R-S-Cysteinylglycine + L-Glutamate)
R03970 (3-Cyano-L-alanine + L-Glutamate <=> gamma-Glutamyl-beta-cyanoalanine + H2O)
R03971 (3-Aminopropiononitrile + L-Glutamate <=> gamma-Glutamyl-beta-aminopropiononitrile + H2O)
R04935 ((5-L-Glutamyl)-peptide + Se-Methyl-L-selenocysteine <=> Peptide + gamma-Glutamyl-Se-methylselenocysteine)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39640.1 | gamma-glutamyl transpeptidase 1. The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. | 0 |
| RefSeq | XP_011006915.1 | PREDICTED: gamma-glutamyltranspeptidase 1-like [Populus euphratica] | 0 |
| Q8VYW6 | Glutathione hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=GGT1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2C7J6 | Glutathione hydrolase OS=Populus trichocarpa OX=3694 GN=POPTR_001G333400 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40453 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17450 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah033120 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19902, Sbi_jg44619 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17335 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl65810, Sgl65842, Sgl70152 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015801, gene:ENSEOMG00000022043 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0008220, CQ.Regalona.r1.2BG0009700 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30024350 |
| Apiaceae | Apium graveolens | 1 | Ag9G00410 |
| Arecaceae | Cocos nucifera | 1 | scaffold003417G000080 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103702932 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.847.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G09882 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G14220.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013706m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g29810.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g048440.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0187 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0128 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g02950 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g18390 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.168 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00024256 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G15062 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1388, BH09.1574, CH09.1692 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0312740, gene-QOZ80_4BG0343880 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0177420.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044869 |
| Poaceae | Oryza coarctata | 2 | Oco07G009280, Oco08G009140 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g41260.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G142700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307183 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr23G010050, Chr25G009610, Chr26G009600, Chr26G009720 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G605000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG050290, gene_TRIDC2BG053550 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G347900.1, TraesCS2B02G366300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb078900_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-36941 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19954 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.1297, evm.TU.LG25.27 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g15050 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.47 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-14845 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17632 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-44 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.31 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007479 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11945 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-17546 |
| Salicaceae | Populus euphratica | 1 | populus_peu01209 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132616532 |
| Solanaceae | Solanum chilense | 1 | SOLCI004109600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015145 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_275 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G1021 |
| Zosteraceae | Zostera marina | 1 | Zosma05g07110.v3.1 |