Basic Information
Locus ID:
populus_peu01172
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box protein SKIP14-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 21467271 | 21470996 | + | populus_peu01172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 32,314.86 Da | 32.91 | 92.72 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 81 | 118 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 125 | 222 | 7.26E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 80 | 126 | 4.58E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 76 | 115 | 9.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 116 | 235 | 4.3E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 69 | 116 | 8.755626 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_011045225.1 | PREDICTED: F-box protein SKIP14-like [Populus euphratica] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6A975 | F-box domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000128250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology