Basic Information
Locus ID:
populus_peu01168
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box protein SKIP14-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 21420302 | 21424064 | + | populus_peu01168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 47,329.46 Da | 35.73 | 80.66 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 149 | 186 | 3.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 193 | 294 | 4.91E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 148 | 194 | 1.23E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 303 | 8.9E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 144 | 183 | 1.6E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 137 | 184 | 8.59666 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_011045225.1 | PREDICTED: F-box protein SKIP14-like [Populus euphratica] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8AKI6 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_006177 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology