Basic Information
Locus ID:
populus_peu01111
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20395880 | 20400466 | + | populus_peu01111 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 46,387.46 Da | 34.61 | 63.91 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 53 | 194 | 8.9E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 36 | 213 | 2.09E-38 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 61 | 219 | 1.4E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 52 | 213 | 30.327198 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_011003121.1 | PREDICTED: NAC domain-containing protein 8 isoform X1 [Populus euphratica] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2ZPD5 | NAC domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_000880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology